Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SSU72Q9NP77 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.57■□□□□ 0.24
SSU72Q9NP77 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSU72Q9NP77 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSU72Q9NP77 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSU72Q9NP77 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSU72Q9NP77 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSU72Q9NP77 PPT1-215ENST00000641471 2368 ntBASIC16.57■□□□□ 0.24
SSU72Q9NP77 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSU72Q9NP77 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.57■□□□□ 0.24
SSU72Q9NP77 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSU72Q9NP77 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSU72Q9NP77 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSU72Q9NP77 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 PAWRP1-201ENST00000451083 565 ntBASIC16.56■□□□□ 0.24
SSU72Q9NP77 AC096582.2-201ENST00000510860 516 ntBASIC16.56■□□□□ 0.24
SSU72Q9NP77 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 Z69720.1-201ENST00000601483 472 ntBASIC16.56■□□□□ 0.24
SSU72Q9NP77 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 AC114341.1-201ENST00000618070 349 ntBASIC16.56■□□□□ 0.24
SSU72Q9NP77 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.56■□□□□ 0.24
SSU72Q9NP77 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSU72Q9NP77 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSU72Q9NP77 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSU72Q9NP77 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSU72Q9NP77 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSU72Q9NP77 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSU72Q9NP77 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 MINOS1P3-201ENST00000457048 203 ntBASIC16.55■□□□□ 0.24
SSU72Q9NP77 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 AL121672.3-201ENST00000608644 468 ntBASIC16.55■□□□□ 0.24
SSU72Q9NP77 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSU72Q9NP77 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 REXO1L3P-201ENST00000622202 1288 ntBASIC16.55■□□□□ 0.24
SSU72Q9NP77 AC133561.5-201ENST00000635547 218 ntBASIC16.55■□□□□ 0.24
SSU72Q9NP77 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSU72Q9NP77 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSU72Q9NP77 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSU72Q9NP77 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.55■□□□□ 0.24
SSU72Q9NP77 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSU72Q9NP77 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSU72Q9NP77 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms