Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 IGLL3P-201ENST00000412472 434 ntBASIC14.62□□□□□ -0.07
CDH20Q9HBT6 HCG4-201ENST00000418983 998 ntBASIC14.62□□□□□ -0.07
CDH20Q9HBT6 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.62□□□□□ -0.07
CDH20Q9HBT6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 AC018845.2-201ENST00000568326 409 ntBASIC14.62□□□□□ -0.07
CDH20Q9HBT6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 MPDU1-223ENST00000582151 728 ntBASIC14.62□□□□□ -0.07
CDH20Q9HBT6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 AC023141.13-201ENST00000604991 943 ntBASIC14.62□□□□□ -0.07
CDH20Q9HBT6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 AL162727.3-201ENST00000635661 2787 ntBASIC14.62□□□□□ -0.07
CDH20Q9HBT6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 PCDHB17P-201ENST00000539533 2393 ntBASIC14.62□□□□□ -0.07
CDH20Q9HBT6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH20Q9HBT6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 AL118508.1-201ENST00000613502 2345 ntBASIC14.61□□□□□ -0.07
CDH20Q9HBT6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 AC131009.4-201ENST00000624048 1740 ntBASIC14.61□□□□□ -0.07
CDH20Q9HBT6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 AC087641.1-201ENST00000557561 1021 ntBASIC14.61□□□□□ -0.07
CDH20Q9HBT6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 ACTL9-202ENST00000612068 1252 ntBASIC14.61□□□□□ -0.07
CDH20Q9HBT6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 MST1L-201ENST00000442552 2185 ntBASIC14.61□□□□□ -0.07
CDH20Q9HBT6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 BCAR1-209ENST00000546196 1340 ntBASIC14.61□□□□□ -0.07
CDH20Q9HBT6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH20Q9HBT6 AC105020.1-201ENST00000435356 2205 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms