Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC25.06■■□□□ 1.6
SCAF1Q9H7N4 AC121493.1-201ENST00000602316 450 ntBASIC25.06■■□□□ 1.6
SCAF1Q9H7N4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC25.06■■□□□ 1.6
SCAF1Q9H7N4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
SCAF1Q9H7N4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 AC138932.1-201ENST00000534164 6830 ntBASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 AC084346.2-201ENST00000607097 949 ntBASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SCAF1Q9H7N4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 ACTG1P14-201ENST00000446382 1122 ntBASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SCAF1Q9H7N4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 HLA-DQB1-201ENST00000374943 1656 ntBASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 BASP1P1-201ENST00000430708 665 ntBASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 AC023141.5-201ENST00000458585 616 ntBASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 AC004877.2-201ENST00000623941 599 ntBASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 AC004777.1-201ENST00000624317 287 ntBASIC25.03■■□□□ 1.6
SCAF1Q9H7N4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC25.02■■□□□ 1.6
SCAF1Q9H7N4 BCAR1-209ENST00000546196 1340 ntBASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms