Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 TPRX2P-201ENST00000535362 881 ntBASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
PCDH11XQ9BZA7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 MIR1909-201ENST00000411312 80 ntBASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 MEP1AP4-201ENST00000423244 1087 ntBASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 AL109936.8-201ENST00000641772 604 ntBASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDH11XQ9BZA7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 RN7SL837P-201ENST00000463010 287 ntBASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AC023310.3-201ENST00000557027 670 ntBASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AC100756.1-201ENST00000562736 682 ntBASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AC138749.3-201ENST00000567691 622 ntBASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AC116165.1-201ENST00000611806 668 ntBASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AL031731.1-201ENST00000642131 2094 ntBASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH11XQ9BZA7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 AC112492.5-201ENST00000421897 457 ntBASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 AL589987.1-201ENST00000453380 819 ntBASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms