Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 PMPCAP1-201ENST00000508114 1576 ntBASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
THUMPD3Q9BV44 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 AC126755.1-201ENST00000525846 6405 ntBASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 AC148477.5-201ENST00000625164 1645 ntBASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 LINC00895-201ENST00000629028 1637 ntBASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 RCN1P2-201ENST00000398357 915 ntBASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 NUS1P1-201ENST00000446295 882 ntBASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
THUMPD3Q9BV44 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 AC097637.2-201ENST00000624096 1997 ntBASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THUMPD3Q9BV44 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 POM121L3P-201ENST00000419331 1163 ntBASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 HCG4P8-203ENST00000443049 980 ntBASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 INTS4P1-201ENST00000438455 1935 ntBASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THUMPD3Q9BV44 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms