Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 AC097637.2-201ENST00000624096 1997 ntBASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 PCDHB17P-201ENST00000539533 2393 ntBASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CHRDL1Q9BU40 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CHRDL1Q9BU40 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CHRDL1Q9BU40 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CHRDL1Q9BU40 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.33□□□□□ -0.27
CHRDL1Q9BU40 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CHRDL1Q9BU40 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CHRDL1Q9BU40 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CHRDL1Q9BU40 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 AL136379.1-201ENST00000623471 2642 ntBASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 KRT18P31-201ENST00000506277 1292 ntBASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GPR89P-201ENST00000407924 1495 ntBASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 AC097376.2-205ENST00000610159 5334 ntBASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRDL1Q9BU40 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 BX005266.1-201ENST00000473402 457 ntBASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 AC106795.1-205ENST00000512851 1056 ntBASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 PRELID1P1-202ENST00000567272 903 ntBASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 AL121772.3-201ENST00000610840 674 ntBASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.32□□□□□ -0.28
CHRDL1Q9BU40 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms