Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC10.03□□□□□ -0.8
LIMD2Q9BT23 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
LIMD2Q9BT23 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC10.02□□□□□ -0.8
LIMD2Q9BT23 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
LIMD2Q9BT23 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
LIMD2Q9BT23 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LIMD2Q9BT23 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
LIMD2Q9BT23 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LIMD2Q9BT23 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AC009336.1-201ENST00000608941 1553 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 SIGLEC30P-201ENST00000455569 941 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AP000867.3-201ENST00000524675 377 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AP002490.2-201ENST00000524791 560 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 TPSP2-201ENST00000561760 610 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AC092329.2-201ENST00000598402 547 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AC114341.1-201ENST00000618070 349 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 BCL10-202ENST00000620248 774 ntTSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 PCDHA3-202ENST00000532566 4594 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AP001094.4-201ENST00000579008 2176 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 NSUN5P1-202ENST00000421140 1535 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 NSUN5P2-203ENST00000457352 1529 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 CES3-203ENST00000543856 3178 ntTSL 2 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC10.02□□□□□ -0.81
LIMD2Q9BT23 AC093525.9-201ENST00000624961 1746 ntBASIC10.02□□□□□ -0.81
LIMD2Q9BT23 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LIMD2Q9BT23 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms