Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 AC073648.2-201ENST00000510116 352 ntBASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 AC008667.4-201ENST00000607370 168 ntBASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 AL353732.1-201ENST00000569618 1459 ntBASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
HERPUD2Q9BSE4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 LINC00554-201ENST00000564841 3011 ntBASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 MRPL3P1-201ENST00000400109 1033 ntBASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 AC136632.2-201ENST00000512891 861 ntBASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 IGHV3-65-201ENST00000523210 341 ntBASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.28■□□□□ 0.36
HERPUD2Q9BSE4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 AC105917.1-201ENST00000506637 2539 ntBASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 AC006449.6-201ENST00000612330 2296 ntBASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 AC008735.5-201ENST00000623544 497 ntBASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERPUD2Q9BSE4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 PCGF3-213ENST00000620529 1899 ntBASIC17.27■□□□□ 0.35
HERPUD2Q9BSE4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERPUD2Q9BSE4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
HERPUD2Q9BSE4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HERPUD2Q9BSE4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.26■□□□□ 0.35
HERPUD2Q9BSE4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERPUD2Q9BSE4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERPUD2Q9BSE4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.26■□□□□ 0.35
HERPUD2Q9BSE4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.26■□□□□ 0.35
HERPUD2Q9BSE4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERPUD2Q9BSE4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms