Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 SPDYE14P-201ENST00000442619 822 ntBASIC19.36■□□□□ 0.69
SLF1Q9BQI6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 AP000842.3-202ENST00000569238 1080 ntBASIC19.36■□□□□ 0.69
SLF1Q9BQI6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 AL390955.2-201ENST00000603032 514 ntBASIC19.36■□□□□ 0.69
SLF1Q9BQI6 AC021097.1-201ENST00000607902 574 ntBASIC19.36■□□□□ 0.69
SLF1Q9BQI6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 LINC00895-201ENST00000629028 1637 ntBASIC19.36■□□□□ 0.69
SLF1Q9BQI6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLF1Q9BQI6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 TUBB3P1-201ENST00000405796 1332 ntBASIC19.35■□□□□ 0.69
SLF1Q9BQI6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.35■□□□□ 0.69
SLF1Q9BQI6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 TUBB8P12-201ENST00000308911 1335 ntBASIC19.34■□□□□ 0.69
SLF1Q9BQI6 TUBB7P-202ENST00000428444 1305 ntBASIC19.34■□□□□ 0.69
SLF1Q9BQI6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 TUBB8P7-204ENST00000567960 1332 ntBASIC19.34■□□□□ 0.69
SLF1Q9BQI6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 AC092053.1-201ENST00000605787 1936 ntBASIC19.34■□□□□ 0.69
SLF1Q9BQI6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLF1Q9BQI6 MIR346-201ENST00000362234 95 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms