Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 PDIA3P1-201ENST00000471856 1510 ntBASIC18.86■□□□□ 0.61
PTPN18Q99952 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN18Q99952 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN18Q99952 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN18Q99952 HAUS4P1-201ENST00000406739 1145 ntBASIC18.86■□□□□ 0.61
PTPN18Q99952 BCYRN1-201ENST00000418539 200 ntBASIC18.86■□□□□ 0.61
PTPN18Q99952 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.86■□□□□ 0.61
PTPN18Q99952 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.86■□□□□ 0.61
PTPN18Q99952 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PTPN18Q99952 RARRES2P5-201ENST00000564013 466 ntBASIC18.86■□□□□ 0.61
PTPN18Q99952 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN18Q99952 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.86■□□□□ 0.61
PTPN18Q99952 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN18Q99952 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN18Q99952 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN18Q99952 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN18Q99952 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
PTPN18Q99952 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN18Q99952 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN18Q99952 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN18Q99952 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN18Q99952 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN18Q99952 TUBB8P12-201ENST00000308911 1335 ntBASIC18.85■□□□□ 0.61
PTPN18Q99952 TUBB7P-202ENST00000428444 1305 ntBASIC18.85■□□□□ 0.61
PTPN18Q99952 TUBB8P7-204ENST00000567960 1332 ntBASIC18.85■□□□□ 0.61
PTPN18Q99952 AC092053.1-201ENST00000605787 1936 ntBASIC18.85■□□□□ 0.61
PTPN18Q99952 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN18Q99952 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN18Q99952 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PTPN18Q99952 CTBP2P5-201ENST00000454986 1264 ntBASIC18.85■□□□□ 0.61
PTPN18Q99952 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PTPN18Q99952 SLC25A47P1-201ENST00000531577 414 ntBASIC18.85■□□□□ 0.61
PTPN18Q99952 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN18Q99952 AC087289.5-201ENST00000586076 3175 ntBASIC18.85■□□□□ 0.61
PTPN18Q99952 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
PTPN18Q99952 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN18Q99952 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PTPN18Q99952 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PTPN18Q99952 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN18Q99952 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PTPN18Q99952 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN18Q99952 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTPN18Q99952 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
PTPN18Q99952 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN18Q99952 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PTPN18Q99952 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PTPN18Q99952 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN18Q99952 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN18Q99952 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PTPN18Q99952 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.84■□□□□ 0.61
PTPN18Q99952 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 AC099336.1-201ENST00000417053 1171 ntBASIC18.84■□□□□ 0.61
PTPN18Q99952 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.84■□□□□ 0.61
PTPN18Q99952 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN18Q99952 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.84■□□□□ 0.61
PTPN18Q99952 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN18Q99952 AC025048.3-201ENST00000590609 569 ntBASIC18.84■□□□□ 0.61
PTPN18Q99952 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 AC233724.13-201ENST00000598383 410 ntBASIC18.84■□□□□ 0.61
PTPN18Q99952 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PTPN18Q99952 AC005702.4-201ENST00000618393 416 ntBASIC18.84■□□□□ 0.61
PTPN18Q99952 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN18Q99952 AC068587.10-201ENST00000641210 219 ntBASIC18.84■□□□□ 0.61
PTPN18Q99952 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PTPN18Q99952 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PTPN18Q99952 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN18Q99952 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.83■□□□□ 0.61
PTPN18Q99952 LINC02012-201ENST00000608206 1725 ntBASIC18.83■□□□□ 0.61
PTPN18Q99952 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.83■□□□□ 0.61
PTPN18Q99952 AC020907.1-201ENST00000616460 1350 ntBASIC18.83■□□□□ 0.61
PTPN18Q99952 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PTPN18Q99952 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PTPN18Q99952 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN18Q99952 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PTPN18Q99952 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms