Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 AC104989.1-201ENST00000519711 778 ntBASIC16.86■□□□□ 0.29
PHOX2BQ99453 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 AL139384.1-201ENST00000612143 3047 ntBASIC16.86■□□□□ 0.29
PHOX2BQ99453 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 OR6D1P-202ENST00000641007 5290 ntBASIC16.86■□□□□ 0.29
PHOX2BQ99453 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHOX2BQ99453 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.86■□□□□ 0.29
PHOX2BQ99453 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 AL023806.1-201ENST00000603994 1649 ntBASIC16.85■□□□□ 0.29
PHOX2BQ99453 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 AC107918.2-201ENST00000530817 355 ntBASIC16.85■□□□□ 0.29
PHOX2BQ99453 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 MIR3615-201ENST00000581999 87 ntBASIC16.85■□□□□ 0.29
PHOX2BQ99453 MIR4515-201ENST00000584082 81 ntBASIC16.85■□□□□ 0.29
PHOX2BQ99453 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 AL391825.1-201ENST00000457671 1364 ntBASIC16.85■□□□□ 0.29
PHOX2BQ99453 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PHOX2BQ99453 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHOX2BQ99453 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 AC141586.5-201ENST00000624546 2050 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 REXO1L9P-201ENST00000604264 2108 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 SPDYE19P-201ENST00000338590 713 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms