Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 CDC14C-201ENST00000428251 1719 ntBASIC15.77■□□□□ 0.11
NR1H4Q96RI1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 AC016027.1-202ENST00000607927 1699 ntBASIC15.76■□□□□ 0.11
NR1H4Q96RI1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 AC139749.1-202ENST00000617529 3139 ntBASIC15.76■□□□□ 0.11
NR1H4Q96RI1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 AL135905.2-201ENST00000584934 1404 ntBASIC15.76■□□□□ 0.11
NR1H4Q96RI1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H4Q96RI1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 TMBIM7P-203ENST00000641617 1718 ntBASIC15.75■□□□□ 0.11
NR1H4Q96RI1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 LINC02447-202ENST00000501888 2146 ntBASIC15.75■□□□□ 0.11
NR1H4Q96RI1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 AP000692.2-201ENST00000608391 879 ntBASIC15.75■□□□□ 0.11
NR1H4Q96RI1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NR1H4Q96RI1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H4Q96RI1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms