Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 AC026748.1-201ENST00000624349 3251 ntBASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 AC112504.1-201ENST00000623415 1841 ntBASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IPQ96QF0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 CDC14C-201ENST00000428251 1719 ntBASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 TSPY17P-201ENST00000450329 467 ntBASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 LINC02447-202ENST00000501888 2146 ntBASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 AC005089.1-201ENST00000619486 2241 ntBASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 KRT89P-201ENST00000620027 1478 ntBASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 AL359736.2-201ENST00000621992 437 ntBASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3IPQ96QF0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 AL353719.1-201ENST00000566847 864 ntBASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 MIR3917-201ENST00000580971 93 ntBASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 FAM197Y4-202ENST00000622692 608 ntBASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 AC092865.7-201ENST00000641832 219 ntBASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 AC023908.3-201ENST00000564211 3047 ntBASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3IPQ96QF0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms