Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 ELK2BP-201ENST00000415014 1224 ntBASIC15.83■□□□□ 0.12
COL21A1Q96P44 AC136632.2-201ENST00000512891 861 ntBASIC15.83■□□□□ 0.12
COL21A1Q96P44 RNA5SP419-201ENST00000515908 135 ntBASIC15.83■□□□□ 0.12
COL21A1Q96P44 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 AC012640.2-201ENST00000561606 901 ntBASIC15.83■□□□□ 0.12
COL21A1Q96P44 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 HLA-A-201ENST00000376802 1334 ntBASIC15.83■□□□□ 0.12
COL21A1Q96P44 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 AL356488.2-201ENST00000602755 427 ntBASIC15.82■□□□□ 0.12
COL21A1Q96P44 MIR7706-201ENST00000613747 67 ntBASIC15.82■□□□□ 0.12
COL21A1Q96P44 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 HLA-A-202ENST00000376806 1854 ntBASIC15.82■□□□□ 0.12
COL21A1Q96P44 AL391256.1-201ENST00000443260 1855 ntBASIC15.82■□□□□ 0.12
COL21A1Q96P44 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL21A1Q96P44 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.82■□□□□ 0.12
COL21A1Q96P44 AL662844.4-201ENST00000606367 2838 ntBASIC15.81■□□□□ 0.12
COL21A1Q96P44 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 AC073621.1-201ENST00000392730 636 ntBASIC15.81■□□□□ 0.12
COL21A1Q96P44 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL21A1Q96P44 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 AC079776.4-201ENST00000511039 504 ntBASIC15.81■□□□□ 0.12
COL21A1Q96P44 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
COL21A1Q96P44 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms