Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC009533.2-201ENST00000543664 586 ntBASIC14.4□□□□□ -0.1
CMTM3Q96MX0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 AC073592.5-201ENST00000624854 528 ntBASIC14.4□□□□□ -0.1
CMTM3Q96MX0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.39□□□□□ -0.11
CMTM3Q96MX0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 MMP23A-201ENST00000234610 1017 ntBASIC14.39□□□□□ -0.11
CMTM3Q96MX0 HBZP1-201ENST00000354915 429 ntBASIC14.39□□□□□ -0.11
CMTM3Q96MX0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 NUS1P1-201ENST00000446295 882 ntBASIC14.39□□□□□ -0.11
CMTM3Q96MX0 SIGLEC30P-201ENST00000455569 941 ntBASIC14.39□□□□□ -0.11
CMTM3Q96MX0 AL359075.1-203ENST00000462729 1002 ntBASIC14.39□□□□□ -0.11
CMTM3Q96MX0 AC092597.1-201ENST00000487352 616 ntBASIC14.39□□□□□ -0.11
CMTM3Q96MX0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 AC005336.2-201ENST00000593183 939 ntBASIC14.39□□□□□ -0.11
CMTM3Q96MX0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMTM3Q96MX0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 TMBIM7P-203ENST00000641617 1718 ntBASIC14.38□□□□□ -0.11
CMTM3Q96MX0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 Z83836.1-201ENST00000624605 1642 ntBASIC14.38□□□□□ -0.11
CMTM3Q96MX0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.38□□□□□ -0.11
CMTM3Q96MX0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 RN7SL606P-201ENST00000472779 293 ntBASIC14.38□□□□□ -0.11
CMTM3Q96MX0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMTM3Q96MX0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms