Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.25■□□□□ 0.35
C9orf72Q96LT7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 AL365203.3-201ENST00000609742 2057 ntBASIC17.25■□□□□ 0.35
C9orf72Q96LT7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 INTS4P1-201ENST00000438455 1935 ntBASIC17.24■□□□□ 0.35
C9orf72Q96LT7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 ACTG1P4-201ENST00000425123 1122 ntBASIC17.24■□□□□ 0.35
C9orf72Q96LT7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 TSPY26P-202ENST00000565928 3884 ntBASIC17.24■□□□□ 0.35
C9orf72Q96LT7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 LINC00895-201ENST00000629028 1637 ntBASIC17.24■□□□□ 0.35
C9orf72Q96LT7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.24■□□□□ 0.35
C9orf72Q96LT7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AC006538.1-201ENST00000567905 1585 ntBASIC17.23■□□□□ 0.35
C9orf72Q96LT7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AC004817.3-201ENST00000602957 2129 ntBASIC17.23■□□□□ 0.35
C9orf72Q96LT7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 SIGLEC30P-201ENST00000455569 941 ntBASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AC064862.7-201ENST00000604520 867 ntBASIC17.23■□□□□ 0.35
C9orf72Q96LT7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf72Q96LT7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms