Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.05■□□□□ 0.48
PGBD4Q96DM1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 AL390955.2-201ENST00000603032 514 ntBASIC18.04■□□□□ 0.48
PGBD4Q96DM1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 AL023806.1-201ENST00000603994 1649 ntBASIC18.04■□□□□ 0.48
PGBD4Q96DM1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 AC092053.1-201ENST00000605787 1936 ntBASIC18.04■□□□□ 0.48
PGBD4Q96DM1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PGBD4Q96DM1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 INGX-202ENST00000489074 768 ntBASIC18.03■□□□□ 0.48
PGBD4Q96DM1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 AC073389.1-201ENST00000595595 795 ntBASIC18.03■□□□□ 0.48
PGBD4Q96DM1 AJ011932.1-201ENST00000621707 465 ntBASIC18.03■□□□□ 0.48
PGBD4Q96DM1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PGBD4Q96DM1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 AP002490.2-201ENST00000524791 560 ntBASIC18.02■□□□□ 0.48
PGBD4Q96DM1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PGBD4Q96DM1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PGBD4Q96DM1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.02■□□□□ 0.47
PGBD4Q96DM1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGBD4Q96DM1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PGBD4Q96DM1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGBD4Q96DM1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.02■□□□□ 0.47
PGBD4Q96DM1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGBD4Q96DM1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PGBD4Q96DM1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PGBD4Q96DM1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms