Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RNF183Q96D59 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RNF183Q96D59 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RNF183Q96D59 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RNF183Q96D59 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RNF183Q96D59 AC011676.5-201ENST00000624864 2660 ntBASIC12.45□□□□□ -0.42
RNF183Q96D59 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RNF183Q96D59 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RNF183Q96D59 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
RNF183Q96D59 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 BCAR1-209ENST00000546196 1340 ntBASIC12.44□□□□□ -0.42
RNF183Q96D59 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF183Q96D59 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RNF183Q96D59 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RNF183Q96D59 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RNF183Q96D59 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF183Q96D59 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RNF183Q96D59 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF183Q96D59 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF183Q96D59 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF183Q96D59 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.44□□□□□ -0.42
RNF183Q96D59 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.44□□□□□ -0.42
RNF183Q96D59 AC005829.1-201ENST00000570002 483 ntBASIC12.44□□□□□ -0.42
RNF183Q96D59 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.44□□□□□ -0.42
RNF183Q96D59 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.44□□□□□ -0.42
RNF183Q96D59 AC023141.13-201ENST00000604991 943 ntBASIC12.44□□□□□ -0.42
RNF183Q96D59 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.44□□□□□ -0.42
RNF183Q96D59 AL691403.2-201ENST00000618460 490 ntBASIC12.44□□□□□ -0.42
RNF183Q96D59 AC004877.2-201ENST00000623941 599 ntBASIC12.44□□□□□ -0.42
RNF183Q96D59 AC092865.6-201ENST00000642101 219 ntBASIC12.44□□□□□ -0.42
RNF183Q96D59 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RNF183Q96D59 UBALD1-205ENST00000590891 2641 ntBASIC12.44□□□□□ -0.42
RNF183Q96D59 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
RNF183Q96D59 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.44□□□□□ -0.42
RNF183Q96D59 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.44□□□□□ -0.42
RNF183Q96D59 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.44□□□□□ -0.42
RNF183Q96D59 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RNF183Q96D59 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.43□□□□□ -0.42
RNF183Q96D59 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.43□□□□□ -0.42
RNF183Q96D59 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 AC129492.6-201ENST00000611383 1305 ntBASIC12.43□□□□□ -0.42
RNF183Q96D59 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RNF183Q96D59 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RNF183Q96D59 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.43□□□□□ -0.42
RNF183Q96D59 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.43□□□□□ -0.42
RNF183Q96D59 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
RNF183Q96D59 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.43□□□□□ -0.42
RNF183Q96D59 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.43□□□□□ -0.42
RNF183Q96D59 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.43□□□□□ -0.42
RNF183Q96D59 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.43□□□□□ -0.42
RNF183Q96D59 PDPK2P-202ENST00000562415 1191 ntBASIC12.43□□□□□ -0.42
RNF183Q96D59 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
RNF183Q96D59 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.43□□□□□ -0.42
RNF183Q96D59 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 AL513190.1-201ENST00000621254 727 ntBASIC12.43□□□□□ -0.42
RNF183Q96D59 AC055717.3-201ENST00000622967 595 ntBASIC12.43□□□□□ -0.42
RNF183Q96D59 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.43□□□□□ -0.42
RNF183Q96D59 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.43□□□□□ -0.42
RNF183Q96D59 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RNF183Q96D59 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms