Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.04■□□□□ -0
PTP4A1Q93096 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.04■□□□□ -0
PTP4A1Q93096 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.04■□□□□ -0
PTP4A1Q93096 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PTP4A1Q93096 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.04■□□□□ -0
PTP4A1Q93096 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.04■□□□□ -0
PTP4A1Q93096 BX005266.1-201ENST00000473402 457 ntBASIC15.04■□□□□ -0
PTP4A1Q93096 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.04■□□□□ -0
PTP4A1Q93096 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.04■□□□□ -0
PTP4A1Q93096 CLEC4GP1-201ENST00000596555 870 ntBASIC15.04■□□□□ -0
PTP4A1Q93096 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.04■□□□□ -0
PTP4A1Q93096 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.04■□□□□ -0
PTP4A1Q93096 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTP4A1Q93096 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PTP4A1Q93096 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PTP4A1Q93096 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.03■□□□□ -0
PTP4A1Q93096 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.03■□□□□ -0
PTP4A1Q93096 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.03■□□□□ -0
PTP4A1Q93096 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.03■□□□□ -0
PTP4A1Q93096 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.03■□□□□ -0
PTP4A1Q93096 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.03■□□□□ -0
PTP4A1Q93096 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.03■□□□□ -0
PTP4A1Q93096 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.03■□□□□ -0
PTP4A1Q93096 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.03■□□□□ -0
PTP4A1Q93096 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.03■□□□□ -0
PTP4A1Q93096 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.03■□□□□ -0
PTP4A1Q93096 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.03■□□□□ -0
PTP4A1Q93096 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.03■□□□□ -0
PTP4A1Q93096 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.03■□□□□ -0
PTP4A1Q93096 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.03■□□□□ -0
PTP4A1Q93096 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.03■□□□□ -0
PTP4A1Q93096 MIR4492-201ENST00000581627 80 ntBASIC15.03■□□□□ -0
PTP4A1Q93096 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.03■□□□□ -0
PTP4A1Q93096 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.03■□□□□ -0
PTP4A1Q93096 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PTP4A1Q93096 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.03■□□□□ -0
PTP4A1Q93096 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTP4A1Q93096 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.03■□□□□ -0
PTP4A1Q93096 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PTP4A1Q93096 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
PTP4A1Q93096 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.02■□□□□ -0
PTP4A1Q93096 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 NCF1C-201ENST00000438382 1427 ntBASIC15.02■□□□□ -0
PTP4A1Q93096 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.02■□□□□ -0
PTP4A1Q93096 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
PTP4A1Q93096 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PTP4A1Q93096 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
PTP4A1Q93096 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.02■□□□□ -0
PTP4A1Q93096 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 PAWRP1-201ENST00000451083 565 ntBASIC15.02■□□□□ -0
PTP4A1Q93096 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.02■□□□□ -0
PTP4A1Q93096 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.02■□□□□ -0
PTP4A1Q93096 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTP4A1Q93096 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.02■□□□□ -0
PTP4A1Q93096 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.02■□□□□ -0
PTP4A1Q93096 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms