Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP13Q92995 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
USP13Q92995 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 CROCCP1-201ENST00000426910 5675 ntBASIC17.47■□□□□ 0.39
USP13Q92995 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP13Q92995 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.47■□□□□ 0.39
USP13Q92995 RNU1-129P-201ENST00000384064 167 ntBASIC17.47■□□□□ 0.39
USP13Q92995 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.47■□□□□ 0.39
USP13Q92995 GPS2P2-201ENST00000430745 888 ntBASIC17.47■□□□□ 0.39
USP13Q92995 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP13Q92995 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP13Q92995 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
USP13Q92995 LINC01225-203ENST00000563550 1244 ntBASIC17.47■□□□□ 0.39
USP13Q92995 U1.21-201ENST00000580816 167 ntBASIC17.47■□□□□ 0.39
USP13Q92995 AC015911.4-201ENST00000588022 1070 ntBASIC17.47■□□□□ 0.39
USP13Q92995 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USP13Q92995 AC005498.2-205ENST00000593218 784 ntBASIC17.47■□□□□ 0.39
USP13Q92995 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP13Q92995 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.47■□□□□ 0.39
USP13Q92995 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.47■□□□□ 0.39
USP13Q92995 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.47■□□□□ 0.39
USP13Q92995 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.47■□□□□ 0.39
USP13Q92995 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.47■□□□□ 0.39
USP13Q92995 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USP13Q92995 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP13Q92995 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
USP13Q92995 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.47■□□□□ 0.39
USP13Q92995 FRMD8P1-201ENST00000440433 1524 ntBASIC17.47■□□□□ 0.39
USP13Q92995 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP13Q92995 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP13Q92995 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.46■□□□□ 0.39
USP13Q92995 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP13Q92995 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.46■□□□□ 0.39
USP13Q92995 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
USP13Q92995 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
USP13Q92995 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USP13Q92995 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.46■□□□□ 0.39
USP13Q92995 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP13Q92995 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.46■□□□□ 0.39
USP13Q92995 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP13Q92995 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.46■□□□□ 0.39
USP13Q92995 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.46■□□□□ 0.39
USP13Q92995 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP13Q92995 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.46■□□□□ 0.39
USP13Q92995 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.46■□□□□ 0.39
USP13Q92995 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
USP13Q92995 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP13Q92995 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.46■□□□□ 0.39
USP13Q92995 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP13Q92995 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP13Q92995 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP13Q92995 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
USP13Q92995 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USP13Q92995 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
USP13Q92995 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
USP13Q92995 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
USP13Q92995 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
USP13Q92995 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
USP13Q92995 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
USP13Q92995 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
USP13Q92995 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP13Q92995 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP13Q92995 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
USP13Q92995 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
USP13Q92995 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP13Q92995 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.45■□□□□ 0.38
USP13Q92995 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
USP13Q92995 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.45■□□□□ 0.38
USP13Q92995 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
USP13Q92995 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.45■□□□□ 0.38
USP13Q92995 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP13Q92995 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP13Q92995 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP13Q92995 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP13Q92995 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP13Q92995 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP13Q92995 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.45■□□□□ 0.38
USP13Q92995 BCRP1-201ENST00000444246 691 ntBASIC17.45■□□□□ 0.38
USP13Q92995 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.45■□□□□ 0.38
USP13Q92995 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.45■□□□□ 0.38
USP13Q92995 AC087641.1-201ENST00000557561 1021 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms