Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 GPAA1P2-202ENST00000606848 1787 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 KRT16P4-201ENST00000453883 522 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AC132008.2-207ENST00000454517 770 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AC087163.2-201ENST00000457299 853 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 POU5F1P6-201ENST00000466990 990 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AC091167.2-201ENST00000579581 588 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 NKAPP1-205ENST00000585790 367 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AL589182.2-201ENST00000619332 1049 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 PCGF3-213ENST00000620529 1899 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AC104640.1-201ENST00000562617 2109 ntBASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC44A1Q8WWI5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 REXO1L8P-201ENST00000604378 1897 ntBASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 AC131009.4-201ENST00000624048 1740 ntBASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 LINC01144-201ENST00000626198 1710 ntBASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 AL139288.1-201ENST00000623748 933 ntBASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLC44A1Q8WWI5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 HYMAI-201ENST00000635591 3347 ntBASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC44A1Q8WWI5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC44A1Q8WWI5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms