Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 MED15P5-201ENST00000423150 992 ntBASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 AC034105.1-201ENST00000563488 319 ntBASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 AC027601.4-201ENST00000611259 610 ntBASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH19Q8TAB3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 AC140113.2-201ENST00000604370 208 ntBASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 AC010507.1-201ENST00000633895 436 ntBASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH19Q8TAB3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH19Q8TAB3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH19Q8TAB3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH19Q8TAB3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.21■□□□□ 0.34
PCDH19Q8TAB3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 BX842568.4-201ENST00000421222 227 ntBASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 AL513480.1-201ENST00000451731 511 ntBASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 AC139530.3-201ENST00000620344 690 ntBASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH19Q8TAB3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH19Q8TAB3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms