Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDND2Q8NHS1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLDND2Q8NHS1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AC129492.6-201ENST00000611383 1305 ntBASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AC027796.2-201ENST00000575326 344 ntBASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDND2Q8NHS1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 ACTG1P14-201ENST00000446382 1122 ntBASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDND2Q8NHS1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms