Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 AC005521.1-201ENST00000393351 872 ntBASIC16.29■□□□□ 0.2
HIPK4Q8NE63 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 RNF126P1-202ENST00000569893 925 ntBASIC16.29■□□□□ 0.2
HIPK4Q8NE63 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIPK4Q8NE63 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 AC092647.4-201ENST00000457211 535 ntBASIC16.28■□□□□ 0.2
HIPK4Q8NE63 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK4Q8NE63 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 AC073347.1-201ENST00000421633 2643 ntBASIC16.27■□□□□ 0.2
HIPK4Q8NE63 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 AK4P3-201ENST00000418260 669 ntBASIC16.27■□□□□ 0.2
HIPK4Q8NE63 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 AC109462.3-201ENST00000573934 613 ntBASIC16.27■□□□□ 0.2
HIPK4Q8NE63 AC019129.2-201ENST00000609837 1235 ntBASIC16.27■□□□□ 0.2
HIPK4Q8NE63 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK4Q8NE63 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
HIPK4Q8NE63 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HIPK4Q8NE63 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.27■□□□□ 0.19
HIPK4Q8NE63 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIPK4Q8NE63 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIPK4Q8NE63 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HIPK4Q8NE63 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HIPK4Q8NE63 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HIPK4Q8NE63 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms