Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBR1Q8IWV7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC23.25■■□□□ 1.31
UBR1Q8IWV7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
UBR1Q8IWV7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC23.25■■□□□ 1.31
UBR1Q8IWV7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC23.25■■□□□ 1.31
UBR1Q8IWV7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC23.25■■□□□ 1.31
UBR1Q8IWV7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC23.25■■□□□ 1.31
UBR1Q8IWV7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC23.25■■□□□ 1.31
UBR1Q8IWV7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 AP000812.2-201ENST00000538934 718 ntBASIC23.24■■□□□ 1.31
UBR1Q8IWV7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 RHOQP1-201ENST00000555758 579 ntBASIC23.24■■□□□ 1.31
UBR1Q8IWV7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
UBR1Q8IWV7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 ACTG1P3-201ENST00000431775 1114 ntBASIC23.23■■□□□ 1.31
UBR1Q8IWV7 AC007551.1-201ENST00000457394 519 ntBASIC23.23■■□□□ 1.31
UBR1Q8IWV7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 HNRNPA1P13-201ENST00000510646 963 ntBASIC23.23■■□□□ 1.31
UBR1Q8IWV7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 KRT90P-201ENST00000549264 1064 ntBASIC23.23■■□□□ 1.31
UBR1Q8IWV7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 DUX4L45-201ENST00000566406 1057 ntBASIC23.23■■□□□ 1.31
UBR1Q8IWV7 AC103810.3-201ENST00000583567 96 ntBASIC23.23■■□□□ 1.31
UBR1Q8IWV7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 MIR4321-201ENST00000592276 80 ntBASIC23.23■■□□□ 1.31
UBR1Q8IWV7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBR1Q8IWV7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 AC244669.2-201ENST00000612320 853 ntBASIC23.22■■□□□ 1.31
UBR1Q8IWV7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 FO393414.2-201ENST00000405153 598 ntBASIC23.22■■□□□ 1.31
UBR1Q8IWV7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 AC106760.1-201ENST00000508690 800 ntBASIC23.22■■□□□ 1.31
UBR1Q8IWV7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC23.22■■□□□ 1.31
UBR1Q8IWV7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC23.21■■□□□ 1.31
UBR1Q8IWV7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms