Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.11■□□□□ 0.01
RP1L1Q8IWN7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 AL138918.1-201ENST00000568306 659 ntBASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 LYSMD4-203ENST00000378904 2122 ntBASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 TREML5P-201ENST00000421694 576 ntBASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 IGHV3-62-201ENST00000520057 340 ntBASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 AC005412.3-201ENST00000580309 715 ntBASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RP1L1Q8IWN7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 GIMAP3P-201ENST00000495150 836 ntBASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 RNU1-129P-201ENST00000384064 167 ntBASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 HCG4-201ENST00000418983 998 ntBASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 U1.21-201ENST00000580816 167 ntBASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 AC004233.3-201ENST00000607794 1269 ntBASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RP1L1Q8IWN7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 FLJ13224-201ENST00000313737 1514 ntBASIC15.08■□□□□ 0.01
RP1L1Q8IWN7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms