Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 PDIA3P1-201ENST00000471856 1510 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC005332.8-201ENST00000622750 2735 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AL021920.2-201ENST00000624828 1351 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AL589987.1-201ENST00000453380 819 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 RN7SL618P-201ENST00000477850 296 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 SRD5A3P1-201ENST00000603021 949 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 KRT8P39-201ENST00000396270 1433 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AL031731.1-201ENST00000642131 2094 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC114501.2-201ENST00000439631 535 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 AL603756.1-201ENST00000606511 2163 ntBASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13BQ7Z7G8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AC011495.1-201ENST00000498085 584 ntBASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13BQ7Z7G8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms