Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 OR8S1-201ENST00000310194 1080 ntBASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 SPTLC1P1-201ENST00000447199 261 ntBASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 AL596325.1-201ENST00000563991 1082 ntBASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 HLA-A-202ENST00000376806 1854 ntBASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAI1Q7Z5J4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 AC003101.2-201ENST00000612557 442 ntBASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 RNF216P1-203ENST00000404404 2427 ntBASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 AC105020.1-201ENST00000435356 2205 ntBASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RAI1Q7Z5J4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 AC244107.1-201ENST00000442033 332 ntBASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 LTB4R2-202ENST00000528054 3092 ntBASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
RAI1Q7Z5J4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms