Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC149Q6ZUS6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 AL035456.1-201ENST00000456064 1369 ntBASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 AL353705.2-201ENST00000428243 662 ntBASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 AL138828.2-201ENST00000615812 383 ntBASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 SPTSSB-204ENST00000617024 1292 ntBASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC149Q6ZUS6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 MIR6752-201ENST00000618442 71 ntBASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC149Q6ZUS6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms