Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 RNF216P1-203ENST00000404404 2427 ntBASIC19.78■□□□□ 0.76
CTR9Q6PD62 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTR9Q6PD62 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.78■□□□□ 0.76
CTR9Q6PD62 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 HLA-J-203ENST00000494367 1087 ntBASIC19.77■□□□□ 0.76
CTR9Q6PD62 AC109322.1-201ENST00000524499 1264 ntBASIC19.77■□□□□ 0.76
CTR9Q6PD62 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 AC009093.7-201ENST00000623853 1223 ntBASIC19.77■□□□□ 0.76
CTR9Q6PD62 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.77■□□□□ 0.76
CTR9Q6PD62 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTR9Q6PD62 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTR9Q6PD62 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.77■□□□□ 0.75
CTR9Q6PD62 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CTR9Q6PD62 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CTR9Q6PD62 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTR9Q6PD62 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTR9Q6PD62 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 AC084121.4-201ENST00000641598 221 ntBASIC19.76■□□□□ 0.75
CTR9Q6PD62 AF228730.8-201ENST00000642140 221 ntBASIC19.76■□□□□ 0.75
CTR9Q6PD62 AC022211.2-201ENST00000585075 2527 ntBASIC19.76■□□□□ 0.75
CTR9Q6PD62 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTR9Q6PD62 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CTR9Q6PD62 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTR9Q6PD62 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 AC078925.2-201ENST00000624013 1973 ntBASIC19.75■□□□□ 0.75
CTR9Q6PD62 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTR9Q6PD62 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTR9Q6PD62 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTR9Q6PD62 GPS2P2-201ENST00000430745 888 ntBASIC19.75■□□□□ 0.75
CTR9Q6PD62 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTR9Q6PD62 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 AC027796.2-201ENST00000575326 344 ntBASIC19.75■□□□□ 0.75
CTR9Q6PD62 AC027307.2-201ENST00000591252 911 ntBASIC19.75■□□□□ 0.75
CTR9Q6PD62 AC093028.1-201ENST00000622998 982 ntBASIC19.75■□□□□ 0.75
CTR9Q6PD62 AC008267.7-201ENST00000624570 1194 ntBASIC19.75■□□□□ 0.75
CTR9Q6PD62 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms