Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 HMGA1P7-201ENST00000406908 502 ntBASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 AL031432.2-201ENST00000566714 459 ntBASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 AL928711.1-201ENST00000570165 459 ntBASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 AL645728.2-201ENST00000641974 660 ntBASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 AC012569.1-201ENST00000591191 1524 ntBASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFWD3Q6PCD5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 AC211486.1-202ENST00000416371 468 ntBASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 CEND1P1-201ENST00000451006 455 ntBASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 AC004967.1-201ENST00000453589 447 ntBASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 AC211476.1-201ENST00000503899 468 ntBASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 YBX1P5-201ENST00000509441 847 ntBASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 AC092902.6-201ENST00000641783 218 ntBASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFWD3Q6PCD5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RFWD3Q6PCD5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RFWD3Q6PCD5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
RFWD3Q6PCD5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.39■□□□□ 0.38
RFWD3Q6PCD5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 MKNK2P1-201ENST00000437526 628 ntBASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 MPDU1-223ENST00000582151 728 ntBASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RFWD3Q6PCD5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms