Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 AL391256.1-201ENST00000443260 1855 ntBASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 AC098799.1-201ENST00000504752 800 ntBASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNFT1Q5M7Z0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RNFT1Q5M7Z0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNFT1Q5M7Z0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.96□□□□□ -0.02
RNFT1Q5M7Z0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNFT1Q5M7Z0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNFT1Q5M7Z0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.94□□□□□ -0.02
RNFT1Q5M7Z0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms