Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.45■□□□□ 0.7
GABPAQ06546 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
GABPAQ06546 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.45■□□□□ 0.7
GABPAQ06546 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GABPAQ06546 HLA-J-202ENST00000469281 1241 ntBASIC19.45■□□□□ 0.7
GABPAQ06546 BANF1P1-201ENST00000553684 263 ntBASIC19.45■□□□□ 0.7
GABPAQ06546 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.45■□□□□ 0.7
GABPAQ06546 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.45■□□□□ 0.7
GABPAQ06546 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.45■□□□□ 0.7
GABPAQ06546 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GABPAQ06546 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GABPAQ06546 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABPAQ06546 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GABPAQ06546 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABPAQ06546 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.45■□□□□ 0.7
GABPAQ06546 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABPAQ06546 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GABPAQ06546 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
GABPAQ06546 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.45■□□□□ 0.7
GABPAQ06546 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.44■□□□□ 0.7
GABPAQ06546 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GABPAQ06546 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.44■□□□□ 0.7
GABPAQ06546 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.44■□□□□ 0.7
GABPAQ06546 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.44■□□□□ 0.7
GABPAQ06546 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.44■□□□□ 0.7
GABPAQ06546 MIR4745-201ENST00000577608 62 ntBASIC19.44■□□□□ 0.7
GABPAQ06546 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.44■□□□□ 0.7
GABPAQ06546 AC020765.3-201ENST00000613051 740 ntBASIC19.44■□□□□ 0.7
GABPAQ06546 AL390754.1-201ENST00000619088 582 ntBASIC19.44■□□□□ 0.7
GABPAQ06546 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.44■□□□□ 0.7
GABPAQ06546 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.44■□□□□ 0.7
GABPAQ06546 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.44■□□□□ 0.7
GABPAQ06546 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.44■□□□□ 0.7
GABPAQ06546 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.44■□□□□ 0.7
GABPAQ06546 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
GABPAQ06546 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABPAQ06546 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
GABPAQ06546 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.43■□□□□ 0.7
GABPAQ06546 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.43■□□□□ 0.7
GABPAQ06546 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.43■□□□□ 0.7
GABPAQ06546 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GABPAQ06546 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
GABPAQ06546 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GABPAQ06546 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GABPAQ06546 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 TSSK5P-201ENST00000423978 907 ntBASIC19.43■□□□□ 0.7
GABPAQ06546 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.43■□□□□ 0.7
GABPAQ06546 INGX-202ENST00000489074 768 ntBASIC19.43■□□□□ 0.7
GABPAQ06546 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.43■□□□□ 0.7
GABPAQ06546 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
GABPAQ06546 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GABPAQ06546 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.43■□□□□ 0.7
GABPAQ06546 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.43■□□□□ 0.7
GABPAQ06546 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPAQ06546 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABPAQ06546 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPAQ06546 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPAQ06546 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
GABPAQ06546 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPAQ06546 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GABPAQ06546 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.42■□□□□ 0.7
GABPAQ06546 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPAQ06546 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPAQ06546 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.42■□□□□ 0.7
GABPAQ06546 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPAQ06546 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABPAQ06546 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
GABPAQ06546 AC004890.2-204ENST00000481968 304 ntBASIC19.42■□□□□ 0.7
GABPAQ06546 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.42■□□□□ 0.7
GABPAQ06546 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABPAQ06546 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.42■□□□□ 0.7
GABPAQ06546 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.42■□□□□ 0.7
GABPAQ06546 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.42■□□□□ 0.7
GABPAQ06546 AC003101.2-201ENST00000612557 442 ntBASIC19.42■□□□□ 0.7
GABPAQ06546 SPDYE12P-201ENST00000618416 771 ntBASIC19.42■□□□□ 0.7
GABPAQ06546 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.42■□□□□ 0.7
GABPAQ06546 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms