Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.42■□□□□ 0.7
IRX3P78415 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.42■□□□□ 0.7
IRX3P78415 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX3P78415 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
IRX3P78415 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IRX3P78415 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.42■□□□□ 0.7
IRX3P78415 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
IRX3P78415 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IRX3P78415 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
IRX3P78415 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.41■□□□□ 0.7
IRX3P78415 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IRX3P78415 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.41■□□□□ 0.7
IRX3P78415 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 AC092580.3-201ENST00000430932 139 ntBASIC19.41■□□□□ 0.7
IRX3P78415 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.41■□□□□ 0.7
IRX3P78415 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 AL354751.1-201ENST00000412768 1863 ntBASIC19.41■□□□□ 0.7
IRX3P78415 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
IRX3P78415 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX3P78415 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.41■□□□□ 0.7
IRX3P78415 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
IRX3P78415 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.4■□□□□ 0.7
IRX3P78415 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX3P78415 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IRX3P78415 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IRX3P78415 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.4■□□□□ 0.7
IRX3P78415 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.4■□□□□ 0.7
IRX3P78415 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.4■□□□□ 0.7
IRX3P78415 AC241585.1-201ENST00000433527 519 ntBASIC19.4■□□□□ 0.7
IRX3P78415 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.4■□□□□ 0.7
IRX3P78415 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.4■□□□□ 0.7
IRX3P78415 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.4■□□□□ 0.7
IRX3P78415 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
IRX3P78415 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.4■□□□□ 0.7
IRX3P78415 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.4■□□□□ 0.7
IRX3P78415 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IRX3P78415 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.4■□□□□ 0.7
IRX3P78415 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX3P78415 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IRX3P78415 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.4■□□□□ 0.7
IRX3P78415 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX3P78415 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.4■□□□□ 0.7
IRX3P78415 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IRX3P78415 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
IRX3P78415 AC093525.9-201ENST00000624961 1746 ntBASIC19.39■□□□□ 0.7
IRX3P78415 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.39■□□□□ 0.7
IRX3P78415 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
IRX3P78415 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
IRX3P78415 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IRX3P78415 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.39■□□□□ 0.69
IRX3P78415 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
IRX3P78415 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IRX3P78415 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.39■□□□□ 0.69
IRX3P78415 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.39■□□□□ 0.69
IRX3P78415 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.39■□□□□ 0.69
IRX3P78415 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.39■□□□□ 0.69
IRX3P78415 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.39■□□□□ 0.69
IRX3P78415 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.39■□□□□ 0.69
IRX3P78415 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.39■□□□□ 0.69
IRX3P78415 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.39■□□□□ 0.69
IRX3P78415 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.39■□□□□ 0.69
IRX3P78415 AL138918.1-201ENST00000568306 659 ntBASIC19.39■□□□□ 0.69
IRX3P78415 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.39■□□□□ 0.69
IRX3P78415 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.39■□□□□ 0.69
IRX3P78415 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IRX3P78415 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.39■□□□□ 0.69
IRX3P78415 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IRX3P78415 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.39■□□□□ 0.69
IRX3P78415 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IRX3P78415 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
IRX3P78415 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms