Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB38P57729 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RAB38P57729 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAB38P57729 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB38P57729 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB38P57729 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB38P57729 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB38P57729 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 RPSAP43-201ENST00000402237 625 ntBASIC15.66■□□□□ 0.1
RAB38P57729 UPF3AP3-201ENST00000420996 769 ntBASIC15.66■□□□□ 0.1
RAB38P57729 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.66■□□□□ 0.1
RAB38P57729 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB38P57729 RARRES2P8-201ENST00000566335 367 ntBASIC15.66■□□□□ 0.1
RAB38P57729 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 AC005829.1-201ENST00000570002 483 ntBASIC15.66■□□□□ 0.1
RAB38P57729 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB38P57729 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
RAB38P57729 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 AC020765.3-201ENST00000613051 740 ntBASIC15.66■□□□□ 0.1
RAB38P57729 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 WASH6P-202ENST00000359512 1437 ntBASIC15.66■□□□□ 0.1
RAB38P57729 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAB38P57729 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB38P57729 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB38P57729 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB38P57729 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.66■□□□□ 0.1
RAB38P57729 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RAB38P57729 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RAB38P57729 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB38P57729 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB38P57729 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 AC016027.1-202ENST00000607927 1699 ntBASIC15.65■□□□□ 0.1
RAB38P57729 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.65■□□□□ 0.1
RAB38P57729 AL355306.1-201ENST00000415580 579 ntBASIC15.65■□□□□ 0.1
RAB38P57729 KRT18P34-201ENST00000488218 1270 ntBASIC15.65■□□□□ 0.1
RAB38P57729 AC112482.1-201ENST00000492080 688 ntBASIC15.65■□□□□ 0.1
RAB38P57729 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB38P57729 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB38P57729 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.65■□□□□ 0.1
RAB38P57729 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.65■□□□□ 0.1
RAB38P57729 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 AC023511.2-201ENST00000618803 211 ntBASIC15.65■□□□□ 0.1
RAB38P57729 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RAB38P57729 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB38P57729 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
RAB38P57729 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAB38P57729 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RAB38P57729 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB38P57729 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB38P57729 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB38P57729 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB38P57729 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.64■□□□□ 0.1
RAB38P57729 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB38P57729 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB38P57729 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB38P57729 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 KRT18P13-201ENST00000400056 1290 ntBASIC15.64■□□□□ 0.09
RAB38P57729 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB38P57729 AL671277.1-201ENST00000429656 993 ntBASIC15.64■□□□□ 0.09
RAB38P57729 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB38P57729 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB38P57729 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB38P57729 FAM86C2P-203ENST00000528684 1004 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms