Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDH6P55285 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.38■□□□□ 0.37
CDH6P55285 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.38■□□□□ 0.37
CDH6P55285 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CDH6P55285 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.38■□□□□ 0.37
CDH6P55285 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH6P55285 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH6P55285 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH6P55285 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH6P55285 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH6P55285 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CDH6P55285 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH6P55285 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH6P55285 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CDH6P55285 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 AL031731.1-201ENST00000642131 2094 ntBASIC17.37■□□□□ 0.37
CDH6P55285 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 GGT3P-204ENST00000453783 1664 ntBASIC17.37■□□□□ 0.37
CDH6P55285 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH6P55285 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
CDH6P55285 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CDH6P55285 HCG4-201ENST00000418983 998 ntBASIC17.37■□□□□ 0.37
CDH6P55285 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.37■□□□□ 0.37
CDH6P55285 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CDH6P55285 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH6P55285 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH6P55285 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH6P55285 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH6P55285 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDH6P55285 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDH6P55285 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH6P55285 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 ME2P1-201ENST00000426028 1970 ntBASIC17.37■□□□□ 0.37
CDH6P55285 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH6P55285 DOC2GP-204ENST00000639052 2548 ntBASIC17.37■□□□□ 0.37
CDH6P55285 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CDH6P55285 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDH6P55285 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH6P55285 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH6P55285 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH6P55285 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH6P55285 PRSS29P-201ENST00000440800 595 ntBASIC17.36■□□□□ 0.37
CDH6P55285 FDX1P1-201ENST00000449115 551 ntBASIC17.36■□□□□ 0.37
CDH6P55285 UNC93B6-202ENST00000528242 690 ntBASIC17.36■□□□□ 0.37
CDH6P55285 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH6P55285 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH6P55285 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH6P55285 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.36■□□□□ 0.37
CDH6P55285 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CDH6P55285 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH6P55285 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH6P55285 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms