Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 KLF2P3-201ENST00000451977 1087 ntBASIC16.04■□□□□ 0.16
EPHA4P54764 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA4P54764 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA4P54764 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA4P54764 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA4P54764 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA4P54764 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.04■□□□□ 0.16
EPHA4P54764 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
EPHA4P54764 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
EPHA4P54764 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
EPHA4P54764 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
EPHA4P54764 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA4P54764 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
EPHA4P54764 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
EPHA4P54764 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.03■□□□□ 0.16
EPHA4P54764 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.03■□□□□ 0.16
EPHA4P54764 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
EPHA4P54764 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.03■□□□□ 0.16
EPHA4P54764 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.03■□□□□ 0.16
EPHA4P54764 AC142381.1-201ENST00000426099 345 ntBASIC16.03■□□□□ 0.16
EPHA4P54764 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.03■□□□□ 0.16
EPHA4P54764 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.03■□□□□ 0.16
EPHA4P54764 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.03■□□□□ 0.16
EPHA4P54764 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.03■□□□□ 0.16
EPHA4P54764 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.03■□□□□ 0.16
EPHA4P54764 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
EPHA4P54764 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA4P54764 AC092068.3-201ENST00000587894 2016 ntBASIC16.02■□□□□ 0.16
EPHA4P54764 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
EPHA4P54764 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.02■□□□□ 0.16
EPHA4P54764 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.02■□□□□ 0.16
EPHA4P54764 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
EPHA4P54764 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
EPHA4P54764 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
EPHA4P54764 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
EPHA4P54764 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.02■□□□□ 0.16
EPHA4P54764 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
EPHA4P54764 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.02■□□□□ 0.16
EPHA4P54764 AC107890.1-201ENST00000422478 521 ntBASIC16.02■□□□□ 0.16
EPHA4P54764 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
EPHA4P54764 AC125807.1-201ENST00000483097 614 ntBASIC16.02■□□□□ 0.16
EPHA4P54764 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 PRYP6-201ENST00000514804 343 ntBASIC16.02■□□□□ 0.16
EPHA4P54764 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.02■□□□□ 0.16
EPHA4P54764 SPCS2P1-201ENST00000561636 679 ntBASIC16.02■□□□□ 0.16
EPHA4P54764 AL138918.1-201ENST00000568306 659 ntBASIC16.02■□□□□ 0.16
EPHA4P54764 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EPHA4P54764 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
EPHA4P54764 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
EPHA4P54764 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA4P54764 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
EPHA4P54764 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
EPHA4P54764 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA4P54764 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA4P54764 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
EPHA4P54764 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.15
EPHA4P54764 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA4P54764 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
EPHA4P54764 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
EPHA4P54764 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.02■□□□□ 0.15
EPHA4P54764 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EPHA4P54764 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.02■□□□□ 0.15
EPHA4P54764 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms