Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.36■□□□□ 0.53
PMS1P54277 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.36■□□□□ 0.53
PMS1P54277 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PMS1P54277 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.36■□□□□ 0.53
PMS1P54277 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.36■□□□□ 0.53
PMS1P54277 AC005593.1-201ENST00000624894 515 ntBASIC18.36■□□□□ 0.53
PMS1P54277 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.36■□□□□ 0.53
PMS1P54277 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PMS1P54277 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.35■□□□□ 0.53
PMS1P54277 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.35■□□□□ 0.53
PMS1P54277 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.35■□□□□ 0.53
PMS1P54277 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.35■□□□□ 0.53
PMS1P54277 AL450487.1-201ENST00000426799 995 ntBASIC18.35■□□□□ 0.53
PMS1P54277 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.35■□□□□ 0.53
PMS1P54277 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PMS1P54277 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
PMS1P54277 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PMS1P54277 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.35■□□□□ 0.53
PMS1P54277 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.35■□□□□ 0.53
PMS1P54277 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.35■□□□□ 0.53
PMS1P54277 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.35■□□□□ 0.53
PMS1P54277 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.35■□□□□ 0.53
PMS1P54277 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 PCGF3-213ENST00000620529 1899 ntBASIC18.35■□□□□ 0.53
PMS1P54277 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PMS1P54277 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PMS1P54277 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.34■□□□□ 0.53
PMS1P54277 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 PAUPAR-201ENST00000630360 2965 ntBASIC18.34■□□□□ 0.53
PMS1P54277 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.34■□□□□ 0.53
PMS1P54277 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.34■□□□□ 0.53
PMS1P54277 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.34■□□□□ 0.53
PMS1P54277 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.34■□□□□ 0.53
PMS1P54277 MRPL20P1-201ENST00000400819 433 ntBASIC18.34■□□□□ 0.53
PMS1P54277 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.34■□□□□ 0.53
PMS1P54277 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.34■□□□□ 0.53
PMS1P54277 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.34■□□□□ 0.53
PMS1P54277 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.34■□□□□ 0.53
PMS1P54277 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PMS1P54277 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.34■□□□□ 0.53
PMS1P54277 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.34■□□□□ 0.53
PMS1P54277 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PMS1P54277 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PMS1P54277 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PMS1P54277 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PMS1P54277 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PMS1P54277 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PMS1P54277 REXO1L8P-201ENST00000604378 1897 ntBASIC18.33■□□□□ 0.53
PMS1P54277 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PMS1P54277 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms