Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LBX1P52954 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LBX1P52954 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LBX1P52954 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LBX1P52954 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.52■□□□□ 0.56
LBX1P52954 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LBX1P52954 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.52■□□□□ 0.56
LBX1P52954 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LBX1P52954 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LBX1P52954 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LBX1P52954 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LBX1P52954 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.52■□□□□ 0.56
LBX1P52954 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.52■□□□□ 0.56
LBX1P52954 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.52■□□□□ 0.56
LBX1P52954 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LBX1P52954 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.52■□□□□ 0.56
LBX1P52954 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LBX1P52954 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.52■□□□□ 0.55
LBX1P52954 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LBX1P52954 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LBX1P52954 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LBX1P52954 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.51■□□□□ 0.55
LBX1P52954 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.51■□□□□ 0.55
LBX1P52954 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.51■□□□□ 0.55
LBX1P52954 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.51■□□□□ 0.55
LBX1P52954 AC005332.7-201ENST00000614046 2005 ntBASIC18.51■□□□□ 0.55
LBX1P52954 AC018735.1-201ENST00000437208 1502 ntBASIC18.51■□□□□ 0.55
LBX1P52954 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.51■□□□□ 0.55
LBX1P52954 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.51■□□□□ 0.55
LBX1P52954 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.51■□□□□ 0.55
LBX1P52954 AC093433.1-201ENST00000458048 571 ntBASIC18.51■□□□□ 0.55
LBX1P52954 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.51■□□□□ 0.55
LBX1P52954 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LBX1P52954 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.51■□□□□ 0.55
LBX1P52954 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.51■□□□□ 0.55
LBX1P52954 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
LBX1P52954 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LBX1P52954 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.51■□□□□ 0.55
LBX1P52954 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.51■□□□□ 0.55
LBX1P52954 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LBX1P52954 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LBX1P52954 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
LBX1P52954 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LBX1P52954 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LBX1P52954 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.5■□□□□ 0.55
LBX1P52954 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LBX1P52954 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.5■□□□□ 0.55
LBX1P52954 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 KRT8P49-201ENST00000604166 1432 ntBASIC18.5■□□□□ 0.55
LBX1P52954 KRT18P55-202ENST00000578578 1546 ntBASIC18.5■□□□□ 0.55
LBX1P52954 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LBX1P52954 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.5■□□□□ 0.55
LBX1P52954 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.5■□□□□ 0.55
LBX1P52954 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.5■□□□□ 0.55
LBX1P52954 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.5■□□□□ 0.55
LBX1P52954 HOMER2P2-201ENST00000451621 847 ntBASIC18.5■□□□□ 0.55
LBX1P52954 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.5■□□□□ 0.55
LBX1P52954 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.5■□□□□ 0.55
LBX1P52954 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
LBX1P52954 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LBX1P52954 PGAM1P5-201ENST00000548011 764 ntBASIC18.5■□□□□ 0.55
LBX1P52954 GNRHR2-203ENST00000581100 1187 ntBASIC18.5■□□□□ 0.55
LBX1P52954 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.5■□□□□ 0.55
LBX1P52954 LINC01115-203ENST00000606068 577 ntBASIC18.5■□□□□ 0.55
LBX1P52954 AL096828.3-201ENST00000615354 462 ntBASIC18.5■□□□□ 0.55
LBX1P52954 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
LBX1P52954 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.5■□□□□ 0.55
LBX1P52954 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
LBX1P52954 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms