Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PDE6CP51160 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PDE6CP51160 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDE6CP51160 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6CP51160 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6CP51160 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.07■□□□□ 0.48
PDE6CP51160 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6CP51160 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE6CP51160 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
PDE6CP51160 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6CP51160 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 AL162727.3-201ENST00000635661 2787 ntBASIC18.06■□□□□ 0.48
PDE6CP51160 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDE6CP51160 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.06■□□□□ 0.48
PDE6CP51160 UPF3AP3-201ENST00000420996 769 ntBASIC18.06■□□□□ 0.48
PDE6CP51160 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6CP51160 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.06■□□□□ 0.48
PDE6CP51160 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PDE6CP51160 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.06■□□□□ 0.48
PDE6CP51160 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE6CP51160 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.06■□□□□ 0.48
PDE6CP51160 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE6CP51160 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6CP51160 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.06■□□□□ 0.48
PDE6CP51160 MTDHP5-201ENST00000598980 586 ntBASIC18.06■□□□□ 0.48
PDE6CP51160 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE6CP51160 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE6CP51160 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE6CP51160 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6CP51160 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PDE6CP51160 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6CP51160 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDE6CP51160 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6CP51160 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDE6CP51160 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
PDE6CP51160 AC002310.6-201ENST00000624451 1377 ntBASIC18.05■□□□□ 0.48
PDE6CP51160 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDE6CP51160 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.05■□□□□ 0.48
PDE6CP51160 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 PCDH8P1-201ENST00000428983 2773 ntBASIC18.05■□□□□ 0.48
PDE6CP51160 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.05■□□□□ 0.48
PDE6CP51160 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6CP51160 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6CP51160 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDE6CP51160 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6CP51160 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDE6CP51160 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.05■□□□□ 0.48
PDE6CP51160 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.05■□□□□ 0.48
PDE6CP51160 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.05■□□□□ 0.48
PDE6CP51160 AC013467.2-201ENST00000605472 835 ntBASIC18.05■□□□□ 0.48
PDE6CP51160 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.05■□□□□ 0.48
PDE6CP51160 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6CP51160 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDE6CP51160 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 AC006277.1-201ENST00000624348 1610 ntBASIC18.05■□□□□ 0.48
PDE6CP51160 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6CP51160 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PDE6CP51160 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6CP51160 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms