Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.36■□□□□ 0.53
CPT1AP50416 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.36■□□□□ 0.53
CPT1AP50416 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CPT1AP50416 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CPT1AP50416 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CPT1AP50416 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.35■□□□□ 0.53
CPT1AP50416 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CPT1AP50416 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.35■□□□□ 0.53
CPT1AP50416 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.35■□□□□ 0.53
CPT1AP50416 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CPT1AP50416 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.35■□□□□ 0.53
CPT1AP50416 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CPT1AP50416 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.35■□□□□ 0.53
CPT1AP50416 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
CPT1AP50416 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.35■□□□□ 0.53
CPT1AP50416 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.35■□□□□ 0.53
CPT1AP50416 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.35■□□□□ 0.53
CPT1AP50416 AC135586.1-201ENST00000539323 574 ntBASIC18.35■□□□□ 0.53
CPT1AP50416 AC140912.1-201ENST00000577171 1054 ntBASIC18.35■□□□□ 0.53
CPT1AP50416 AC020765.3-201ENST00000613051 740 ntBASIC18.35■□□□□ 0.53
CPT1AP50416 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CPT1AP50416 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 AC004840.1-201ENST00000636359 365 ntBASIC18.35■□□□□ 0.53
CPT1AP50416 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CPT1AP50416 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.35■□□□□ 0.53
CPT1AP50416 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.35■□□□□ 0.53
CPT1AP50416 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CPT1AP50416 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPT1AP50416 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CPT1AP50416 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.34■□□□□ 0.53
CPT1AP50416 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CPT1AP50416 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.34■□□□□ 0.53
CPT1AP50416 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.34■□□□□ 0.53
CPT1AP50416 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.34■□□□□ 0.53
CPT1AP50416 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.34■□□□□ 0.53
CPT1AP50416 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CPT1AP50416 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
CPT1AP50416 NOC2LP2-201ENST00000407594 1944 ntBASIC18.34■□□□□ 0.53
CPT1AP50416 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 OR8S1-201ENST00000310194 1080 ntBASIC18.34■□□□□ 0.53
CPT1AP50416 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 AC093724.1-201ENST00000448659 1027 ntBASIC18.34■□□□□ 0.53
CPT1AP50416 RN7SL618P-201ENST00000477850 296 ntBASIC18.34■□□□□ 0.53
CPT1AP50416 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CPT1AP50416 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.34■□□□□ 0.53
CPT1AP50416 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.34■□□□□ 0.53
CPT1AP50416 AL391256.1-201ENST00000443260 1855 ntBASIC18.34■□□□□ 0.53
CPT1AP50416 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CPT1AP50416 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPT1AP50416 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CPT1AP50416 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.34■□□□□ 0.53
CPT1AP50416 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.33■□□□□ 0.53
CPT1AP50416 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPT1AP50416 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.33■□□□□ 0.53
CPT1AP50416 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPT1AP50416 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPT1AP50416 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPT1AP50416 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPT1AP50416 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPT1AP50416 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CPT1AP50416 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.33■□□□□ 0.53
CPT1AP50416 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPT1AP50416 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
CPT1AP50416 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPT1AP50416 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.33■□□□□ 0.52
CPT1AP50416 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.33■□□□□ 0.52
CPT1AP50416 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPT1AP50416 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.33■□□□□ 0.52
CPT1AP50416 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.33■□□□□ 0.52
CPT1AP50416 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.33■□□□□ 0.52
CPT1AP50416 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.33■□□□□ 0.52
CPT1AP50416 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms