Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.54■□□□□ 0.56
CENPFP49454 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CENPFP49454 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.54■□□□□ 0.56
CENPFP49454 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.54■□□□□ 0.56
CENPFP49454 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.54■□□□□ 0.56
CENPFP49454 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CENPFP49454 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.54■□□□□ 0.56
CENPFP49454 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 AC092053.1-201ENST00000605787 1936 ntBASIC18.54■□□□□ 0.56
CENPFP49454 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.54■□□□□ 0.56
CENPFP49454 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.54■□□□□ 0.56
CENPFP49454 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.54■□□□□ 0.56
CENPFP49454 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CENPFP49454 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.54■□□□□ 0.56
CENPFP49454 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CENPFP49454 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPFP49454 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.53■□□□□ 0.56
CENPFP49454 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.53■□□□□ 0.56
CENPFP49454 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.53■□□□□ 0.56
CENPFP49454 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.53■□□□□ 0.56
CENPFP49454 CALR4P-201ENST00000431943 946 ntBASIC18.53■□□□□ 0.56
CENPFP49454 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.53■□□□□ 0.56
CENPFP49454 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.53■□□□□ 0.56
CENPFP49454 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.53■□□□□ 0.56
CENPFP49454 AC025048.3-201ENST00000590609 569 ntBASIC18.53■□□□□ 0.56
CENPFP49454 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.53■□□□□ 0.56
CENPFP49454 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CENPFP49454 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CENPFP49454 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.53■□□□□ 0.56
CENPFP49454 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.53■□□□□ 0.56
CENPFP49454 FO681548.1-201ENST00000455617 1132 ntBASIC18.53■□□□□ 0.56
CENPFP49454 KRT8P13-201ENST00000463294 1010 ntBASIC18.53■□□□□ 0.56
CENPFP49454 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.53■□□□□ 0.56
CENPFP49454 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.53■□□□□ 0.56
CENPFP49454 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.53■□□□□ 0.56
CENPFP49454 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.53■□□□□ 0.56
CENPFP49454 PCDHB17P-201ENST00000539533 2393 ntBASIC18.53■□□□□ 0.56
CENPFP49454 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.53■□□□□ 0.56
CENPFP49454 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CENPFP49454 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.53■□□□□ 0.56
CENPFP49454 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.53■□□□□ 0.56
CENPFP49454 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CENPFP49454 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.53■□□□□ 0.56
CENPFP49454 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.52■□□□□ 0.56
CENPFP49454 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPFP49454 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CENPFP49454 ACTG1P17-201ENST00000558391 1119 ntBASIC18.52■□□□□ 0.56
CENPFP49454 MIR4706-201ENST00000582134 82 ntBASIC18.52■□□□□ 0.56
CENPFP49454 CYP2A7P1-201ENST00000595391 815 ntBASIC18.52■□□□□ 0.56
CENPFP49454 AC009542.2-202ENST00000619004 1067 ntBASIC18.52■□□□□ 0.56
CENPFP49454 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.52■□□□□ 0.56
CENPFP49454 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CENPFP49454 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPFP49454 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CENPFP49454 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPFP49454 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPFP49454 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.52■□□□□ 0.56
CENPFP49454 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CENPFP49454 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPFP49454 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CENPFP49454 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CENPFP49454 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.52■□□□□ 0.55
CENPFP49454 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.52■□□□□ 0.55
CENPFP49454 AC090164.3-201ENST00000610780 2143 ntBASIC18.52■□□□□ 0.55
CENPFP49454 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPFP49454 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CENPFP49454 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.51■□□□□ 0.55
CENPFP49454 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.51■□□□□ 0.55
CENPFP49454 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPFP49454 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CENPFP49454 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.51■□□□□ 0.55
CENPFP49454 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms