Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.72■□□□□ 0.59
TM4SF4P48230 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.72■□□□□ 0.59
TM4SF4P48230 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 RPL13AP20-201ENST00000459725 609 ntBASIC18.72■□□□□ 0.59
TM4SF4P48230 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TM4SF4P48230 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.72■□□□□ 0.59
TM4SF4P48230 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.72■□□□□ 0.59
TM4SF4P48230 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.72■□□□□ 0.59
TM4SF4P48230 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.72■□□□□ 0.59
TM4SF4P48230 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.72■□□□□ 0.59
TM4SF4P48230 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TM4SF4P48230 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TM4SF4P48230 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF4P48230 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TM4SF4P48230 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TM4SF4P48230 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF4P48230 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF4P48230 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF4P48230 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF4P48230 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF4P48230 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.71■□□□□ 0.59
TM4SF4P48230 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.71■□□□□ 0.59
TM4SF4P48230 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.71■□□□□ 0.59
TM4SF4P48230 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF4P48230 AC068587.3-201ENST00000526613 355 ntBASIC18.71■□□□□ 0.59
TM4SF4P48230 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 AC124947.2-201ENST00000547118 1133 ntBASIC18.71■□□□□ 0.59
TM4SF4P48230 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TM4SF4P48230 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF4P48230 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.71■□□□□ 0.59
TM4SF4P48230 AL359711.2-201ENST00000563105 872 ntBASIC18.71■□□□□ 0.59
TM4SF4P48230 DUX4L45-201ENST00000566406 1057 ntBASIC18.71■□□□□ 0.59
TM4SF4P48230 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF4P48230 BRI3BPP1-201ENST00000594224 787 ntBASIC18.71■□□□□ 0.59
TM4SF4P48230 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TM4SF4P48230 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF4P48230 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
TM4SF4P48230 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.7■□□□□ 0.58
TM4SF4P48230 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 SLC25A24P2-201ENST00000415059 510 ntBASIC18.7■□□□□ 0.58
TM4SF4P48230 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TM4SF4P48230 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.7■□□□□ 0.58
TM4SF4P48230 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TM4SF4P48230 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.7■□□□□ 0.58
TM4SF4P48230 RN7SL560P-201ENST00000577943 264 ntBASIC18.7■□□□□ 0.58
TM4SF4P48230 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.7■□□□□ 0.58
TM4SF4P48230 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF4P48230 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TM4SF4P48230 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF4P48230 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms