Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NEDD4P46934 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NEDD4P46934 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 TIMM8BP1-201ENST00000452384 211 ntBASIC19.59■□□□□ 0.73
NEDD4P46934 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
NEDD4P46934 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 AC243562.1-201ENST00000560672 389 ntBASIC19.59■□□□□ 0.73
NEDD4P46934 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.59■□□□□ 0.73
NEDD4P46934 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.59■□□□□ 0.73
NEDD4P46934 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 AC022145.2-201ENST00000598203 171 ntBASIC19.59■□□□□ 0.73
NEDD4P46934 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NEDD4P46934 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NEDD4P46934 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NEDD4P46934 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NEDD4P46934 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD4P46934 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.59■□□□□ 0.73
NEDD4P46934 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEDD4P46934 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
NEDD4P46934 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEDD4P46934 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.58■□□□□ 0.73
NEDD4P46934 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
NEDD4P46934 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEDD4P46934 AP006288.1-201ENST00000446065 395 ntBASIC19.58■□□□□ 0.73
NEDD4P46934 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.58■□□□□ 0.73
NEDD4P46934 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEDD4P46934 AL691403.2-201ENST00000618460 490 ntBASIC19.58■□□□□ 0.73
NEDD4P46934 AC105339.1-204ENST00000636249 355 ntBASIC19.58■□□□□ 0.73
NEDD4P46934 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEDD4P46934 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.58■□□□□ 0.73
NEDD4P46934 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEDD4P46934 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.58■□□□□ 0.73
NEDD4P46934 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NEDD4P46934 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NEDD4P46934 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NEDD4P46934 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEDD4P46934 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
NEDD4P46934 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NEDD4P46934 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEDD4P46934 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEDD4P46934 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.58■□□□□ 0.72
NEDD4P46934 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NEDD4P46934 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 AC090340.1-201ENST00000620778 4980 ntBASIC19.57■□□□□ 0.72
NEDD4P46934 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NEDD4P46934 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 AC079140.1-201ENST00000508039 487 ntBASIC19.57■□□□□ 0.72
NEDD4P46934 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.57■□□□□ 0.72
NEDD4P46934 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.57■□□□□ 0.72
NEDD4P46934 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.57■□□□□ 0.72
NEDD4P46934 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.57■□□□□ 0.72
NEDD4P46934 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.57■□□□□ 0.72
NEDD4P46934 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.57■□□□□ 0.72
NEDD4P46934 AC026120.1-201ENST00000611536 926 ntBASIC19.57■□□□□ 0.72
NEDD4P46934 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.57■□□□□ 0.72
NEDD4P46934 AL513210.1-201ENST00000629608 234 ntBASIC19.57■□□□□ 0.72
NEDD4P46934 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.57■□□□□ 0.72
NEDD4P46934 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NEDD4P46934 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NEDD4P46934 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NEDD4P46934 AC018695.7-201ENST00000624587 2492 ntBASIC19.57■□□□□ 0.72
NEDD4P46934 AKAP8P1-201ENST00000434743 1349 ntBASIC19.57■□□□□ 0.72
NEDD4P46934 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEDD4P46934 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.57■□□□□ 0.72
NEDD4P46934 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.56■□□□□ 0.72
NEDD4P46934 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.56■□□□□ 0.72
NEDD4P46934 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.56■□□□□ 0.72
NEDD4P46934 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.56■□□□□ 0.72
NEDD4P46934 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms