Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC125634.1-201ENST00000438758 1403 ntBASIC13.73□□□□□ -0.21
NKX2-1P43699 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-1P43699 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NKX2-1P43699 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-1P43699 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.73□□□□□ -0.21
NKX2-1P43699 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
NKX2-1P43699 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
NKX2-1P43699 STARP1-201ENST00000397973 869 ntBASIC13.73□□□□□ -0.21
NKX2-1P43699 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-1P43699 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.73□□□□□ -0.21
NKX2-1P43699 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
NKX2-1P43699 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.73□□□□□ -0.21
NKX2-1P43699 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 AL390719.2-201ENST00000606993 987 ntBASIC13.73□□□□□ -0.21
NKX2-1P43699 AL138966.2-201ENST00000621997 464 ntBASIC13.73□□□□□ -0.21
NKX2-1P43699 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-1P43699 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NKX2-1P43699 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
NKX2-1P43699 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 AC010491.1-201ENST00000563101 2797 ntBASIC13.72□□□□□ -0.21
NKX2-1P43699 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 AC002310.6-201ENST00000624451 1377 ntBASIC13.72□□□□□ -0.21
NKX2-1P43699 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.72□□□□□ -0.21
NKX2-1P43699 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.72□□□□□ -0.21
NKX2-1P43699 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.72□□□□□ -0.21
NKX2-1P43699 AL359075.1-203ENST00000462729 1002 ntBASIC13.72□□□□□ -0.21
NKX2-1P43699 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
NKX2-1P43699 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 AC092597.1-201ENST00000487352 616 ntBASIC13.72□□□□□ -0.21
NKX2-1P43699 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
NKX2-1P43699 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-1P43699 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-1P43699 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NKX2-1P43699 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-1P43699 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms