Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SSR1P43307 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 AL603756.1-201ENST00000606511 2163 ntBASIC17.83■□□□□ 0.44
SSR1P43307 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
SSR1P43307 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.83■□□□□ 0.44
SSR1P43307 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.83■□□□□ 0.44
SSR1P43307 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.83■□□□□ 0.44
SSR1P43307 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SSR1P43307 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.82■□□□□ 0.44
SSR1P43307 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.82■□□□□ 0.44
SSR1P43307 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SSR1P43307 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.82■□□□□ 0.44
SSR1P43307 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
SSR1P43307 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 PRYP5-201ENST00000451909 266 ntBASIC17.82■□□□□ 0.44
SSR1P43307 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.82■□□□□ 0.44
SSR1P43307 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.82■□□□□ 0.44
SSR1P43307 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.82■□□□□ 0.44
SSR1P43307 AC012313.10-201ENST00000623509 926 ntBASIC17.82■□□□□ 0.44
SSR1P43307 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SSR1P43307 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SSR1P43307 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.82■□□□□ 0.44
SSR1P43307 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 AL391256.1-201ENST00000443260 1855 ntBASIC17.82■□□□□ 0.44
SSR1P43307 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSR1P43307 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.82■□□□□ 0.44
SSR1P43307 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.81■□□□□ 0.44
SSR1P43307 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.81■□□□□ 0.44
SSR1P43307 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.81■□□□□ 0.44
SSR1P43307 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.81■□□□□ 0.44
SSR1P43307 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SSR1P43307 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SSR1P43307 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 TSPY19P-201ENST00000418461 509 ntBASIC17.81■□□□□ 0.44
SSR1P43307 TSPY18P-201ENST00000441642 509 ntBASIC17.81■□□□□ 0.44
SSR1P43307 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.81■□□□□ 0.44
SSR1P43307 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.81■□□□□ 0.44
SSR1P43307 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SSR1P43307 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 SART3-203ENST00000546611 1184 ntBASIC17.81■□□□□ 0.44
SSR1P43307 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.81■□□□□ 0.44
SSR1P43307 MTDHP4-201ENST00000600287 670 ntBASIC17.81■□□□□ 0.44
SSR1P43307 AL355877.3-201ENST00000622820 899 ntBASIC17.81■□□□□ 0.44
SSR1P43307 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
SSR1P43307 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.81■□□□□ 0.44
SSR1P43307 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.81■□□□□ 0.44
SSR1P43307 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 PCDH8P1-201ENST00000428983 2773 ntBASIC17.81■□□□□ 0.44
SSR1P43307 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.81■□□□□ 0.44
SSR1P43307 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SSR1P43307 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.81■□□□□ 0.44
SSR1P43307 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.81■□□□□ 0.44
SSR1P43307 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.81■□□□□ 0.44
SSR1P43307 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SSR1P43307 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSR1P43307 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SSR1P43307 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SSR1P43307 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SSR1P43307 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms