Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.58■□□□□ 0.25
HMGCLP35914 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGCLP35914 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.58■□□□□ 0.25
HMGCLP35914 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGCLP35914 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGCLP35914 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
HMGCLP35914 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HMGCLP35914 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.58■□□□□ 0.25
HMGCLP35914 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGCLP35914 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HMGCLP35914 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
HMGCLP35914 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGCLP35914 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 MKNK2P1-201ENST00000437526 628 ntBASIC16.58■□□□□ 0.24
HMGCLP35914 DNAJB3-201ENST00000446806 729 ntBASIC16.58■□□□□ 0.24
HMGCLP35914 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGCLP35914 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.58■□□□□ 0.24
HMGCLP35914 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGCLP35914 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HMGCLP35914 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 AC099522.2-201ENST00000607001 744 ntBASIC16.58■□□□□ 0.24
HMGCLP35914 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HMGCLP35914 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
HMGCLP35914 PCGF3-213ENST00000620529 1899 ntBASIC16.58■□□□□ 0.24
HMGCLP35914 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
HMGCLP35914 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HMGCLP35914 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HMGCLP35914 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCLP35914 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCLP35914 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCLP35914 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGCLP35914 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCLP35914 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCLP35914 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGCLP35914 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGCLP35914 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCLP35914 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGCLP35914 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCLP35914 LINC01144-201ENST00000626198 1710 ntBASIC16.57■□□□□ 0.24
HMGCLP35914 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HMGCLP35914 WASH6P-202ENST00000359512 1437 ntBASIC16.57■□□□□ 0.24
HMGCLP35914 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HMGCLP35914 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HMGCLP35914 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HMGCLP35914 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.57■□□□□ 0.24
HMGCLP35914 FAM58CP-201ENST00000435741 640 ntBASIC16.57■□□□□ 0.24
HMGCLP35914 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.57■□□□□ 0.24
HMGCLP35914 ACTG1P14-201ENST00000446382 1122 ntBASIC16.57■□□□□ 0.24
HMGCLP35914 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGCLP35914 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCLP35914 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.57■□□□□ 0.24
HMGCLP35914 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HMGCLP35914 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.57■□□□□ 0.24
HMGCLP35914 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.57■□□□□ 0.24
HMGCLP35914 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCLP35914 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCLP35914 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.57■□□□□ 0.24
HMGCLP35914 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGCLP35914 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCLP35914 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCLP35914 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCLP35914 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HMGCLP35914 ALOX12P2-203ENST00000570921 1945 ntBASIC16.57■□□□□ 0.24
HMGCLP35914 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HMGCLP35914 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCLP35914 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCLP35914 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCLP35914 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
HMGCLP35914 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HMGCLP35914 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCLP35914 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCLP35914 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms