Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A4P31645 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A4P31645 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A4P31645 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC6A4P31645 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A4P31645 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A4P31645 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A4P31645 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A4P31645 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC6A4P31645 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC6A4P31645 SLC25A39P2-201ENST00000537614 270 ntBASIC17.08■□□□□ 0.32
SLC6A4P31645 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC6A4P31645 KRT8P23-201ENST00000560090 1207 ntBASIC17.08■□□□□ 0.32
SLC6A4P31645 AP000842.3-202ENST00000569238 1080 ntBASIC17.08■□□□□ 0.32
SLC6A4P31645 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC6A4P31645 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A4P31645 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SLC6A4P31645 AC084121.4-201ENST00000641598 221 ntBASIC17.08■□□□□ 0.32
SLC6A4P31645 AF228730.8-201ENST00000642140 221 ntBASIC17.08■□□□□ 0.32
SLC6A4P31645 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A4P31645 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A4P31645 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A4P31645 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A4P31645 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A4P31645 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A4P31645 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SLC6A4P31645 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A4P31645 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A4P31645 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A4P31645 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC6A4P31645 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC6A4P31645 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 MIR346-201ENST00000362234 95 ntBASIC17.07■□□□□ 0.32
SLC6A4P31645 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC6A4P31645 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC6A4P31645 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.07■□□□□ 0.32
SLC6A4P31645 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
SLC6A4P31645 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.07■□□□□ 0.32
SLC6A4P31645 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.07■□□□□ 0.32
SLC6A4P31645 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC6A4P31645 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.07■□□□□ 0.32
SLC6A4P31645 LINC00628-201ENST00000628516 1289 ntBASIC17.07■□□□□ 0.32
SLC6A4P31645 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A4P31645 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A4P31645 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SLC6A4P31645 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SLC6A4P31645 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC6A4P31645 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC6A4P31645 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC6A4P31645 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC6A4P31645 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SLC6A4P31645 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC6A4P31645 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC6A4P31645 HLA-J-202ENST00000469281 1241 ntBASIC17.06■□□□□ 0.32
SLC6A4P31645 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A4P31645 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
SLC6A4P31645 AC027796.2-201ENST00000575326 344 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms