Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC8P31273 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXC8P31273 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC8P31273 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXC8P31273 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXC8P31273 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXC8P31273 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HOXC8P31273 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXC8P31273 AC098614.1-201ENST00000368528 745 ntBASIC17.98■□□□□ 0.47
HOXC8P31273 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 U91328.1-201ENST00000437528 223 ntBASIC17.98■□□□□ 0.47
HOXC8P31273 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 DOC2GP-202ENST00000514950 1163 ntBASIC17.98■□□□□ 0.47
HOXC8P31273 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXC8P31273 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXC8P31273 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXC8P31273 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXC8P31273 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXC8P31273 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC8P31273 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC8P31273 AL645608.8-201ENST00000606034 2086 ntBASIC17.97■□□□□ 0.47
HOXC8P31273 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXC8P31273 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXC8P31273 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
HOXC8P31273 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC8P31273 DGCR5-201ENST00000399539 862 ntBASIC17.97■□□□□ 0.47
HOXC8P31273 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
HOXC8P31273 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC8P31273 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC8P31273 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC8P31273 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXC8P31273 SRD5A3P1-201ENST00000603021 949 ntBASIC17.97■□□□□ 0.47
HOXC8P31273 CHCHD2P3-201ENST00000603038 451 ntBASIC17.97■□□□□ 0.47
HOXC8P31273 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.97■□□□□ 0.47
HOXC8P31273 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
HOXC8P31273 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC8P31273 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXC8P31273 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC8P31273 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HOXC8P31273 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC8P31273 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXC8P31273 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC8P31273 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXC8P31273 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HOXC8P31273 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HOXC8P31273 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 AC138969.3-201ENST00000546612 1459 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 AC138932.2-201ENST00000548268 1459 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 AC126755.4-201ENST00000549796 1459 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC8P31273 SLC7A15P-201ENST00000424028 1363 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HOXC8P31273 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC8P31273 SPDYE19P-201ENST00000338590 713 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 AC087499.6-201ENST00000411576 835 ntBASIC17.96■□□□□ 0.47
HOXC8P31273 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC8P31273 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms