Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD40P25942 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40P25942 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.37□□□□□ -0.11
CD40P25942 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40P25942 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CD40P25942 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CD40P25942 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40P25942 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40P25942 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CD40P25942 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 HMGN1P19-201ENST00000436976 333 ntBASIC14.36□□□□□ -0.11
CD40P25942 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.36□□□□□ -0.11
CD40P25942 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 FAM86GP-201ENST00000448322 971 ntBASIC14.36□□□□□ -0.11
CD40P25942 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.36□□□□□ -0.11
CD40P25942 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 SLC25A39P2-201ENST00000537614 270 ntBASIC14.36□□□□□ -0.11
CD40P25942 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 AP000842.3-202ENST00000569238 1080 ntBASIC14.36□□□□□ -0.11
CD40P25942 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 AP001059.3-201ENST00000619053 235 ntBASIC14.36□□□□□ -0.11
CD40P25942 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD40P25942 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.36□□□□□ -0.11
CD40P25942 SNX33P1-201ENST00000592116 1762 ntBASIC14.36□□□□□ -0.11
CD40P25942 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CD40P25942 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD40P25942 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CD40P25942 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 AL645728.1-201ENST00000366221 2101 ntBASIC14.35□□□□□ -0.11
CD40P25942 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.35□□□□□ -0.11
CD40P25942 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 AP001094.4-201ENST00000579008 2176 ntBASIC14.35□□□□□ -0.11
CD40P25942 MIR346-201ENST00000362234 95 ntBASIC14.35□□□□□ -0.11
CD40P25942 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.35□□□□□ -0.11
CD40P25942 GPS2P2-201ENST00000430745 888 ntBASIC14.35□□□□□ -0.11
CD40P25942 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.35□□□□□ -0.11
CD40P25942 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.35□□□□□ -0.11
CD40P25942 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.35□□□□□ -0.11
CD40P25942 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.35□□□□□ -0.11
CD40P25942 AL512356.2-201ENST00000546955 174 ntBASIC14.35□□□□□ -0.11
CD40P25942 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.35□□□□□ -0.11
CD40P25942 AL138918.1-201ENST00000568306 659 ntBASIC14.35□□□□□ -0.11
CD40P25942 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.35□□□□□ -0.11
CD40P25942 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.35□□□□□ -0.11
CD40P25942 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.35□□□□□ -0.11
CD40P25942 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.35□□□□□ -0.11
CD40P25942 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD40P25942 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.35□□□□□ -0.11
CD40P25942 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.35□□□□□ -0.11
CD40P25942 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40P25942 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40P25942 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms